Target Search

Search:	Example: ath-miR156a
Genome:	Help
Mismatches:	Help

microRNA Filter

Advanced Search Options

Results

Searching for TAAACTTGCGGTGAGAGGCAA in database TAIR8_cdna_20080412

2 search results.

AT4G27890
AT3G16340

Alignments

AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: GTGCCTTTCACCGCAAGTTTT

Hybridization energy: -40.49kcal/mol (91.19 %)

Target gene 5'->3'/43-63	 GTGCCTTTCACCGCAAGTTTT
amiRNA (rev. complement)   	 TTGCCTCTCACCGCAAGTTTA
	  ***** *************

top

AT3G16340.1 | Symbols: ATPDR1, PDR1 | ATPDR1/PDR1 (PLEIOTROPIC DRUG RESISTANCE 1); ATPase, coupled to transmembrane movement of substances | chr3:5539903-5546423 FORWARD
Target region: TATCCACTCACCGCAAGTTAC

Hybridization energy: -31.15kcal/mol (70.16 %)

Target gene 5'->3'/2724-2744	 TATCCACTCACCGCAAGTTAC
amiRNA (rev. complement)   	 TTGCCTCTCACCGCAAGTTTA
	 *  ** *************

top

Target gene 5'->3'/43-63	GTGCCTTTCACCGCAAGTTTT
amiRNA (rev. complement)	TTGCCTCTCACCGCAAGTTTA
	*** ***********

Target gene 5'->3'/2724-2744	TATCCACTCACCGCAAGTTAC
amiRNA (rev. complement)	TTGCCTCTCACCGCAAGTTTA
	* ***********