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Searching for TAAGTCCATCCCAGCATTCTG in database TAIR8_cdna_20080412


2 search results.

AT4G27890
AT3G16620



Alignments


AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: CAGAATCCTGGGATGGACTTC

Hybridization energy: -35.37kcal/mol (80.99 %)

Target gene 5'->3'/841-861 CAGAATCCTGGGATGGACTTC
amiRNA (rev. complement) CAGAATGCTGGGATGGACTTA
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AT3G16620.1 | Symbols: ATTOC120 | ATTOC120 (Arabidopsis thaliana translocon outer complex protein 120); GTP binding / P-P-bond-hydrolysis-driven protein transmembrane transporter | chr3:5658323-5661969 REVERSE
Target region: CAAAATGCTGGGAAGGAATTA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -26.47kcal/mol (60.61 %)

Target gene 5'->3'/2800-2820 CAAAATGCTGGGAAGGAATTA
amiRNA (rev. complement) CAGAATGCTGGGATGGACTTA
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