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Searching for TATCCCAGGATTCTGAGCCAC in database TAIR8_cdna_20080412


3 search results.

AT4G27890
AT1G58230
AT1G65860



Alignments


AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: ATGGCTCAGAATCCTGGGATG

Hybridization energy: -45.82kcal/mol (99.33 %)

Target gene 5'->3'/835-855 ATGGCTCAGAATCCTGGGATG
amiRNA (rev. complement) GTGGCTCAGAATCCTGGGATA
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AT1G58230.1 | Symbols:  | WD-40 repeat family protein / beige-related | chr1:21577371-21582530 FORWARD
Target region: GTGGCTCAGATTCCTGTGAGA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -32.95kcal/mol (71.43 %)

Target gene 5'->3'/1160-1180 GTGGCTCAGATTCCTGTGAGA
amiRNA (rev. complement) GTGGCTCAGAATCCTGGGATA
********** ***** ** *
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AT1G65860.1 | Symbols:  | flavin-containing monooxygenase family protein / FMO family protein | chr1:24502729-24506408 REVERSE
Target region: GTTGCTCATATTCCTGGGATA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -30.02kcal/mol (65.08 %)

Target gene 5'->3'/596-616 GTTGCTCATATTCCTGGGATA
amiRNA (rev. complement) GTGGCTCAGAATCCTGGGATA
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