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Searching for
TATCGAGGGTCTCGCCTCCTC in database TAIR8_cdna_20080412
4 search results.
AT4G27890
AT2G27280
AT2G18193
AT5G14720
AlignmentsAT4G27890.1 | Symbols: | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: GAGGAGGCGAGACCCTCGATG
Hybridization energy: -49.44kcal/mol (99.38 %)
Target gene 5'->3'/22-42 | GAGGAGGCGAGACCCTCGATG |
amiRNA (rev. complement) | GAGGAGGCGAGACCCTCGATA |
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topAT2G27280.1 | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27285.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79937.1) | chr2:11680904-11682691 REVERSE
Target region: GAGGAGGCGAGACTCTCGACG
Possible candidate. More than one mismatch at positions 2-12
Hybridization energy: -44.22kcal/mol (88.88 %)
Target gene 5'->3'/4-24 | GAGGAGGCGAGACTCTCGACG |
amiRNA (rev. complement) | GAGGAGGCGAGACCCTCGATA |
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topAT2G18193.1 | Symbols: | AAA-type ATPase family protein | chr2:7924587-7926359 REVERSE
Target region: GAGGCGAAGAGATCCTCGATA
Hybridization energy: -35.28kcal/mol (70.91 %)
Target gene 5'->3'/422-442 | GAGGCGAAGAGATCCTCGATA |
amiRNA (rev. complement) | GAGGAGGCGAGACCCTCGATA |
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topAT5G14720.1 | Symbols: | protein kinase family protein | chr5:4747863-4753595 REVERSE
Target region: GAGGAGGAGAGAAACTCGATA
Possible candidate. More than one mismatch at positions 2-12
Hybridization energy: -34.70kcal/mol (69.75 %)
Target gene 5'->3'/26-46 | GAGGAGGAGAGAAACTCGATA |
amiRNA (rev. complement) | GAGGAGGCGAGACCCTCGATA |
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