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Searching for
TATCGAGGGTCTCTCTTCCTC in database TAIR8_cdna_20080412
3 search results.
AT4G27890
AT5G14720
AT4G32140
AlignmentsAT4G27890.1 | Symbols: | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: GAGGAGGCGAGACCCTCGATG
Hybridization energy: -40.27kcal/mol (87.93 %)
Target gene 5'->3'/22-42 | GAGGAGGCGAGACCCTCGATG |
amiRNA (rev. complement) | GAGGAAGAGAGACCCTCGATA |
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topAT5G14720.1 | Symbols: | protein kinase family protein | chr5:4747863-4753595 REVERSE
Target region: GAGGAGGAGAGAAACTCGATA
Possible candidate. More than one mismatch at positions 2-12
Hybridization energy: -36.50kcal/mol (79.69 %)
Target gene 5'->3'/26-46 | GAGGAGGAGAGAAACTCGATA |
amiRNA (rev. complement) | GAGGAAGAGAGACCCTCGATA |
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topAT4G32140.1 | Symbols: | similar to membrane protein [Arabidopsis thaliana] (TAIR:AT3G07080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72310.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) | chr4:15522890-15525454 REVERSE
Target region: GAAGATGAGAGACCCTTGATC
Hybridization energy: -33.32kcal/mol (72.75 %)
Target gene 5'->3'/602-622 | GAAGATGAGAGACCCTTGATC |
amiRNA (rev. complement) | GAGGAAGAGAGACCCTCGATA |
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