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Searching for TCATTTAATTTAGAGGTTCCT in database TAIR8_cdna_20080412


3 search results.

AT1G31930
AT1G31930
AT5G25850



Alignments


AT1G31930.1 | Symbols: XLG3 | XLG3 (EXTRA-LARGE GTP-BINDING PROTEIN 3); signal transducer | chr1:11465029-11469145 FORWARD
Target region: AGGAAACTCTTGATTAAATGA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -23.12kcal/mol (64.89 %)

Target gene 5'->3'/2881-2901 AGGAAACTCTTGATTAAATGA
amiRNA (rev. complement) AGGAACCTCTAAATTAAATGA
***** **** *********
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AT1G31930.2 | Symbols: XLG3 | XLG3 (EXTRA-LARGE GTP-BINDING PROTEIN 3); signal transducer | chr1:11464994-11469145 FORWARD
Target region: AGGAAACTCTTGATTAAATGA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -23.12kcal/mol (64.89 %)

Target gene 5'->3'/2854-2874 AGGAAACTCTTGATTAAATGA
amiRNA (rev. complement) AGGAACCTCTAAATTAAATGA
***** **** *********
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AT5G25850.1 | Symbols:  | F-box family protein | chr5:9014085-9015920 FORWARD
Target region: AGAAACCTATATATTAAATGA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -17.36kcal/mol (48.72 %)

Target gene 5'->3'/747-767 AGAAACCTATATATTAAATGA
amiRNA (rev. complement) AGGAACCTCTAAATTAAATGA
** ***** ** *********
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