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Searching for TCCTTGATTTAGTGCCTCCCT in database TAIR8_cdna_20080412


2 search results.

AT4G27890
AT1G52340



Alignments


AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: CGGAAGGCACTAAATCAAGGT

Hybridization energy: -37.00kcal/mol (81.41 %)

Target gene 5'->3'/455-475 CGGAAGGCACTAAATCAAGGT
amiRNA (rev. complement) AGGGAGGCACTAAATCAAGGA
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AT1G52340.1 | Symbols: SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ABA2 | ABA2 (ABA DEFICIENT 2); oxidoreductase | chr1:19493463-19495317 REVERSE
Target region: AGTGAGGCACTACATCGAGGA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -33.27kcal/mol (73.20 %)

Target gene 5'->3'/68-88 AGTGAGGCACTACATCGAGGA
amiRNA (rev. complement) AGGGAGGCACTAAATCAAGGA
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