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Searching for TCTTGGTAGTCCCACCTGCTT in database TAIR8_cdna_20080412


2 search results.

AT4G27890
AT1G06820



Alignments


AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: AAGCAGATGGGACTACCAAGG

Hybridization energy: -40.13kcal/mol (83.64 %)

Target gene 5'->3'/775-795 AAGCAGATGGGACTACCAAGG
amiRNA (rev. complement) AAGCAGGTGGGACTACCAAGA
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AT1G06820.1 | Symbols: CCR2, CRTISO | CRTISO (CAROTENOID ISOMERASE); carotenoid isomerase | chr1:2092945-2096231 REVERSE
Target region: AAGGAGGTGGGAACACCAAGA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -34.76kcal/mol (72.45 %)

Target gene 5'->3'/1501-1521 AAGGAGGTGGGAACACCAAGA
amiRNA (rev. complement) AAGCAGGTGGGACTACCAAGA
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