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Searching for TCTTGGTAGTCCCGTCCGCTT in database TAIR8_cdna_20080412

2 search results.

AT4G27890
AT1G27770

Alignments

AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: AAGCAGATGGGACTACCAAGG

Hybridization energy: -39.77kcal/mol (81.23 %)

Target gene 5'->3'/775-795	 AAGCAGATGGGACTACCAAGG
amiRNA (rev. complement)   	 AAGCGGACGGGACTACCAAGA
	 **** ** ************

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AT1G27770.1 | Symbols: PEA1, ACA1 | ACA1 (autoinhibited Ca2+ -ATPase 1); calcium-transporting ATPase/ calmodulin binding | chr1:9671625-9676144 REVERSE
Target region: ACTCGGAGGGGACTTCCAAGA

Hybridization energy: -34.65kcal/mol (70.77 %)

Target gene 5'->3'/1761-1781	 ACTCGGAGGGGACTTCCAAGA
amiRNA (rev. complement)   	 AAGCGGACGGGACTACCAAGA
	 *  **** ****** ******

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Target gene 5'->3'/775-795	AAGCAGATGGGACTACCAAGG
amiRNA (rev. complement)	AAGCGGACGGGACTACCAAGA
	** ************

Target gene 5'->3'/1761-1781	ACTCGGAGGGGACTTCCAAGA
amiRNA (rev. complement)	AAGCGGACGGGACTACCAAGA
	* ** ** ****