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Searching for TGACGATTAGGTCTCGCCCTT in database TAIR8_cdna_20080412


2 search results.

AT4G27890
AT5G42445



Alignments


AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: AAGGGCAAGACCTAATCGTCG

Hybridization energy: -40.26kcal/mol (85.81 %)

Target gene 5'->3'/521-541 AAGGGCAAGACCTAATCGTCG
amiRNA (rev. complement) AAGGGCGAGACCTAATCGTCA
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AT5G42445.1 | Symbols:  | 60S ribosomal protein L3 (RPL3C), pseudogene, temporary automated functional assignment; blastp match of 61% identity and 1.3e-25 P-value to SP|P35684|RL3_ORYSA 60S ribosomal protein L3. (Rice) {Oryza sativa} | chr5:16993500-16993841 FORWARD
Target region: AAGGAAGAGAGCTAATCGTCA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -31.91kcal/mol (68.01 %)

Target gene 5'->3'/23-43 AAGGAAGAGAGCTAATCGTCA
amiRNA (rev. complement) AAGGGCGAGACCTAATCGTCA
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