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Searching for TGTTAGGAACGATGGCACCCC in database TAIR8_cdna_20080412

2 search results.

AT4G27890
AT1G67550

Alignments

AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: CGGGTCCCATCGTTCCTAACA

Hybridization energy: -39.68kcal/mol (84.50 %)

Target gene 5'->3'/359-379	 CGGGTCCCATCGTTCCTAACA
amiRNA (rev. complement)   	 GGGGTGCCATCGTTCCTAACA
	  **** ***************

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AT1G67550.1 | Symbols: URE | URE (UREASE); urease | chr1:25316403-25321058 FORWARD
Target region: GGGGAGCCATTGATCCTAACA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -34.61kcal/mol (73.70 %)

Target gene 5'->3'/2069-2089	 GGGGAGCCATTGATCCTAACA
amiRNA (rev. complement)   	 GGGGTGCCATCGTTCCTAACA
	 **** ***** * ********

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Target gene 5'->3'/359-379	CGGGTCCCATCGTTCCTAACA
amiRNA (rev. complement)	GGGGTGCCATCGTTCCTAACA
	** *************

Target gene 5'->3'/2069-2089	GGGGAGCCATTGATCCTAACA
amiRNA (rev. complement)	GGGGTGCCATCGTTCCTAACA
	** *** * ********