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Searching for TTACTTGATACTTCCCAACTG in database TAIR8_cdna_20080412


2 search results.

AT1G53165
AT1G53165



Alignments


AT1G53165.1 | Symbols:  | kinase | chr1:19817472-19823232 FORWARD
Target region: CAGTTGGGAAGTACAAAGGAA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -27.39kcal/mol (71.44 %)

Target gene 5'->3'/2058-2078 CAGTTGGGAAGTACAAAGGAA
amiRNA (rev. complement) CAGTTGGGAAGTATCAAGTAA
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AT1G53165.2 | Symbols:  | similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G15220.1); similar to BnMAP4K alpha1 [Brassica napus] (GB:CAA08757.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39315.1); similar to BnMAP4K alpha2 [Brassica napus] (GB:CAA08758.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) | chr1:19817564-19823232 FORWARD
Target region: CAGTTGGGAAGTACAAAGGAA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -27.39kcal/mol (71.44 %)

Target gene 5'->3'/1975-1995 CAGTTGGGAAGTACAAAGGAA
amiRNA (rev. complement) CAGTTGGGAAGTATCAAGTAA
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