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Searching for TTCACCTCACGCTGCAACCAC in database TAIR8_cdna_20080412


2 search results.

AT1G22550
AT5G29635



Alignments


AT1G22550.1 | Symbols:  | proton-dependent oligopeptide transport (POT) family protein | chr1:7966522-7968630 REVERSE
Target region: GTGGTTGCAGCGTTAGTAGAA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -30.00kcal/mol (64.45 %)

Target gene 5'->3'/1347-1367 GTGGTTGCAGCGTTAGTAGAA
amiRNA (rev. complement) GTGGTTGCAGCGTGAGGTGAA
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AT5G29635.1 | Symbols:  | transposable element gene | chr5:11308322-11309946 FORWARD
Target region: GTGGTTGCAGCTTTAGGAGAA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -27.65kcal/mol (59.40 %)

Target gene 5'->3'/49-69 GTGGTTGCAGCTTTAGGAGAA
amiRNA (rev. complement) GTGGTTGCAGCGTGAGGTGAA
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