Target Search

Search:	Example: ath-miR156a
Genome:	Help
Mismatches:	Help

microRNA Filter

Advanced Search Options

Results

Searching for TTCGACGATTAGGTCTCGCCC in database TAIR8_cdna_20080412

2 search results.

AT4G27890
AT3G29796

Alignments

AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: GGGCAAGACCTAATCGTCGAT

Hybridization energy: -39.17kcal/mol (85.15 %)

Target gene 5'->3'/523-543	 GGGCAAGACCTAATCGTCGAT
amiRNA (rev. complement)   	 GGGCGAGACCTAATCGTCGAA
	 **** ***************

top

AT3G29796.1 | Symbols:  | unknown protein | chr3:11711040-11715507 FORWARD
Target region: CGGAGAGATCTATTCGTCGAC

Hybridization energy: -33.12kcal/mol (72.00 %)

Target gene 5'->3'/879-899	 CGGAGAGATCTATTCGTCGAC
amiRNA (rev. complement)   	 GGGCGAGACCTAATCGTCGAA
	  ** **** *** *******

top

Target gene 5'->3'/523-543	GGGCAAGACCTAATCGTCGAT
amiRNA (rev. complement)	GGGCGAGACCTAATCGTCGAA
	** *************

Target gene 5'->3'/879-899	CGGAGAGATCTATTCGTCGAC
amiRNA (rev. complement)	GGGCGAGACCTAATCGTCGAA
	* *******