Target Search

Results

AT1G62770.1 | Symbols:  | invertase/pectin methylesterase inhibitor family protein | chr1:23249551-23250555 REVERSE
Target region: AAGATCCGCCACAACAATGAC

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -34.10kcal/mol (77.11 %)

Target gene 5'->3'/223-243	
AAGATCCGCCACAACAATGAC
amiRNA (rev. complement)   	
AAGATCCGCCACAACATCGAA
	
****************  ** 

AT4G18980.1 | Symbols:  | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45630.1); similar to unknown [Cucumis melo] (GB:ABQ53634.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) | chr4:10398929-10399523 FORWARD
Target region: AAGATCAGTCACAACAACGAA

Possible candidate. Low binding affinity: Only 66.89% of optimal dG

Hybridization energy: -29.58kcal/mol (66.89 %)

Target gene 5'->3'/122-142	
AAGATCAGTCACAACAACGAA
amiRNA (rev. complement)   	
AAGATCCGCCACAACATCGAA
	
****** * ******* ****