Target Search

Search:	Example: ath-miR156a
Genome:	Help
Mismatches:	Help

microRNA Filter

Advanced Search Options

Results

Searching for TTGTGGCCGTTTACGTCGCCG in database TAIR8_cdna_20080412

1 search results.

AT3G31422

Alignments

AT3G31422.1 | Symbols:  | transposable element gene | chr3:12795419-12797545 REVERSE
Target region: CGGCGACGTAAAAGGCAACGA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -34.02kcal/mol (71.41 %)

Target gene 5'->3'/1729-1749	 CGGCGACGTAAAAGGCAACGA
amiRNA (rev. complement)   	 CGGCGACGTAAACGGCCACAA
	 ************ *** ** *

top

Target gene 5'->3'/1729-1749	CGGCGACGTAAAAGGCAACGA
amiRNA (rev. complement)	CGGCGACGTAAACGGCCACAA
	********** * ** *