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Searching for TAGTGTCTATCTCAGGTTCTG in database TAIR8_cdna_20080412


3 search results.

AT4G27890
AT3G63460
AT3G63460



Alignments


AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: GAGAACCTGAGATAGACACTC

Hybridization energy: -41.22kcal/mol (98.73 %)

Target gene 5'->3'/665-685 GAGAACCTGAGATAGACACTC
amiRNA (rev. complement) CAGAACCTGAGATAGACACTA
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AT3G63460.1 | Symbols:  | WD-40 repeat family protein | chr3:23441619-23448319 REVERSE
Target region: CAGAACCTGAGACTAACACTA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -29.75kcal/mol (71.26 %)

Target gene 5'->3'/2454-2474 CAGAACCTGAGACTAACACTA
amiRNA (rev. complement) CAGAACCTGAGATAGACACTA
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AT3G63460.2 | Symbols:  | WD-40 repeat family protein | chr3:23441619-23448319 REVERSE
Target region: CAGAACCTGAGACTAACACTA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -29.75kcal/mol (71.26 %)

Target gene 5'->3'/2448-2468 CAGAACCTGAGACTAACACTA
amiRNA (rev. complement) CAGAACCTGAGATAGACACTA
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