Target Search

Results

AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: ATGGTGCCTTTCACCGCAAGT

Hybridization energy: -37.40kcal/mol (80.64 %)

Target gene 5'->3'/40-60	
ATGGTGCCTTTCACCGCAAGT
amiRNA (rev. complement)   	
ATGGTGGCTTTCACCGCAAGA
	
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AT1G35460.1 | Symbols:  | basic helix-loop-helix (bHLH) family protein | chr1:13039894-13042080 FORWARD
Target region: GTGGTGGCTTTCACCGTCAGA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -37.37kcal/mol (80.57 %)

Target gene 5'->3'/451-471	
GTGGTGGCTTTCACCGTCAGA
amiRNA (rev. complement)   	
ATGGTGGCTTTCACCGCAAGA
	
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AT1G65610.1 | Symbols: ATGH9A2, KOR2 | ATGH9A2/KOR2 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A2); hydrolase, hydrolyzing O-glycosyl compounds | chr1:24395342-24399023 REVERSE
Target region: CTGGTTGCTTGCACCGCAAGA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -34.25kcal/mol (73.85 %)

Target gene 5'->3'/252-272	
CTGGTTGCTTGCACCGCAAGA
amiRNA (rev. complement)   	
ATGGTGGCTTTCACCGCAAGA
	
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AT2G33230.1 | Symbols:  | flavin-containing monooxygenase, putative / FMO, putative | chr2:14087488-14089048 REVERSE
Target region: GCGGTGGGATTCACCGGAAGA

Hybridization energy: -32.76kcal/mol (70.63 %)

Target gene 5'->3'/1147-1167	
GCGGTGGGATTCACCGGAAGA
amiRNA (rev. complement)   	
ATGGTGGCTTTCACCGCAAGA
	
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