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Searching for TGACTTGTACAGCTCGTCCAT in database TAIR8_cdna_20080412


2 search results.

AT4G18440
AT4G33250



Alignments


AT4G18440.1 | Symbols:  | adenylosuccinate lyase, putative / adenylosuccinase, putative | chr4:10186142-10188920 REVERSE
Target region: ATGGATGAGCTGATCAAGTCA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -35.10kcal/mol (78.40 %)

Target gene 5'->3'/735-755 ATGGATGAGCTGATCAAGTCA
amiRNA (rev. complement) ATGGACGAGCTGTACAAGTCA
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AT4G33250.1 | Symbols: TIF3K1, ATTIF3K1, EIF3K | EIF3K (eukaryotic translation initiation factor 3K) | chr4:16038871-16040715 REVERSE
Target region: ATGGAGGAGCAGTTCAAGTCA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -31.08kcal/mol (69.42 %)

Target gene 5'->3'/383-403 ATGGAGGAGCAGTTCAAGTCA
amiRNA (rev. complement) ATGGACGAGCTGTACAAGTCA
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