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Searching for TGATATTCCAGTAGGAGTCAA in database TAIR8_cdna_20080412


3 search results.

AT5G53400
AT4G27890
AT5G60620



Alignments


AT5G53400.1 | Symbols:  | nuclear movement family protein | chr5:21678671-21680798 FORWARD
Target region: ATGACTGCTACTGGAATATCG

Hybridization energy: -36.97kcal/mol (88.64 %)

Target gene 5'->3'/748-768 ATGACTGCTACTGGAATATCG
amiRNA (rev. complement) TTGACTCCTACTGGAATATCA
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AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: ACGACTGCTTCTGGAATATCG

Hybridization energy: -30.96kcal/mol (74.23 %)

Target gene 5'->3'/572-592 ACGACTGCTTCTGGAATATCG
amiRNA (rev. complement) TTGACTCCTACTGGAATATCA
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AT5G60620.1 | Symbols:  | phospholipid/glycerol acyltransferase family protein | chr5:24384424-24387016 FORWARD
Target region: TTGACGCCTTCTGGAATAGCA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -26.81kcal/mol (64.28 %)

Target gene 5'->3'/907-927 TTGACGCCTTCTGGAATAGCA
amiRNA (rev. complement) TTGACTCCTACTGGAATATCA
***** *** ******** **
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