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Searching for TGATATTCCAGTATCAGTCAA in database TAIR8_cdna_20080412


3 search results.

AT5G53400
AT2G45590
AT4G27890



Alignments


AT5G53400.1 | Symbols:  | nuclear movement family protein | chr5:21678671-21680798 FORWARD
Target region: ATGACTGCTACTGGAATATCG

Hybridization energy: -34.14kcal/mol (86.58 %)

Target gene 5'->3'/748-768 ATGACTGCTACTGGAATATCG
amiRNA (rev. complement) TTGACTGATACTGGAATATCA
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AT2G45590.1 | Symbols:  | protein kinase family protein | chr2:18793732-18796062 FORWARD
Target region: TTGACGGATACTGGATTGTCA

Possible candidate. More than one mismatch at positions 2-12

Hybridization energy: -31.00kcal/mol (78.62 %)

Target gene 5'->3'/1121-1141 TTGACGGATACTGGATTGTCA
amiRNA (rev. complement) TTGACTGATACTGGAATATCA
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AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: ACGACTGCTTCTGGAATATCG

Hybridization energy: -28.74kcal/mol (72.89 %)

Target gene 5'->3'/572-592 ACGACTGCTTCTGGAATATCG
amiRNA (rev. complement) TTGACTGATACTGGAATATCA
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