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Searching for TGGAATGTTAATTGTGGCCTC in database TAIR8_cdna_20080412


3 search results.

AT4G27890
AT5G53400
AT3G21770



Alignments


AT4G27890.1 | Symbols:  | nuclear movement family protein | chr4:13886039-13888282 FORWARD
Target region: GAGGTCACAATTAACATTCCA

Hybridization energy: -37.34kcal/mol (92.77 %)

Target gene 5'->3'/430-450 GAGGTCACAATTAACATTCCA
amiRNA (rev. complement) GAGGCCACAATTAACATTCCA
**** ****************
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AT5G53400.1 | Symbols:  | nuclear movement family protein | chr5:21678671-21680798 FORWARD
Target region: GAGGTTACAGTTAACATTCCA

Hybridization energy: -35.23kcal/mol (87.53 %)

Target gene 5'->3'/606-626 GAGGTTACAGTTAACATTCCA
amiRNA (rev. complement) GAGGCCACAATTAACATTCCA
**** *** ***********
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AT3G21770.1 | Symbols:  | peroxidase 30 (PER30) (P30) (PRXR9) | chr3:7673283-7674846 FORWARD
Target region: GAGGCTACTAATAACATTCCA

Possible candidate. Mismatch at position 10 and/or 11

Hybridization energy: -29.68kcal/mol (73.74 %)

Target gene 5'->3'/541-561 GAGGCTACTAATAACATTCCA
amiRNA (rev. complement) GAGGCCACAATTAACATTCCA
***** ** * **********
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